Author

Ondrej Podlahas

Director - Translational Discovery Research (J&J/Janssen) - Cited by 1,547 - molecular evolution - evolution - genomics - infectious diseases

Biography

Ondrej Podlaha is a Bioinformatics Senior Research Scientist II at Gilead based in Foster City, California. Previously, Ondrej was a Postdoctoral Fellow at Harvard University. His research interest includes discovering the genetic and genomic basis that shape human disease.
Title
Cited by
Year
Evolution of the cancer genome
O Podlaha, M Riester, S De, F MichorTrends in Genetics 28 (4), 155-163, 2012201
183
2012
Wings, horns, and butterfly eyespots: how do complex traits evolve?
A Monteiro, O PodlahaPLoS biology 7 (2), e1000037, 2009200
151
2009
Metallothionein polymorphisms in pathological processes
M Raudenska, J Gumulec, O Podlaha, M Sztalmachova, P Babula, ...Metallomics 6 (1), 55-68, 2014201
115
2014
Positive selection for indel substitutions in the rodent sperm protein catsper1
O Podlaha, DM Webb, PK Tucker, J ZhangMolecular biology and evolution 22 (9), 1845-1852, 2005200
62
2005
ABCG2 regulates self-renewal and stem cell marker expression but not tumorigenicity or radiation resistance of glioma cells
B Wee, A Pietras, T Ozawa, E Bazzoli, O Podlaha, C Antczak, ...Scientific reports 6 (1), 25956, 2016201
53
2016
Differential serum cytokine profiles in patients with chronic hepatitis B, C, and hepatocellular carcinoma
J Estevez, VL Chen, O Podlaha, B Li, A Le, P Vutien, ET Chang, ...Scientific reports 7 (1), 11867, 2017201
50
2017
Nonneutral Evolution of the Transcribed Pseudogene Makorin1-p1 in Mice
O Podlaha, J ZhangMolecular biology and evolution 21 (12), 2202-2209, 2004200
44
2004
Over-expression of Ultrabithorax alters embryonic body plan and wing patterns in the butterfly Bicyclus anynana
X Tong, S Hrycaj, O Podlaha, A Popadic, A MonteiroDevelopmental biology 394 (2), 357-366, 2014201
41
2014
Genomic modeling of hepatitis B virus integration frequency in the human genome
O Podlaha, G Wu, B Downie, R Ramamurthy, A Gaggar, M Subramanian, ...PloS one 14 (7), e0220376, 2019201
39
2019
Pseudogenes and their evolution
O Podlaha, J ZhangeLS, 2010201
34
2010
The Microevolution of V1r Vomeronasal Receptor Genes in Mice
SH Park, O Podlaha, WE Grus, J ZhangGenome Biology and Evolution 3, 401-412, 2011201
27
2011
Histone modifications are associated with transcript isoform diversity in normal and cancer cells
O Podlaha, S De, M Gonen, F MichorPLoS Computational Biology 10 (6), e1003611, 2014201
26
2014
Inhibition of viral replication reduces transcriptionally active distinct hepatitis B virus integrations with implications on host gene dysregulation
YC Hsu, V Suri, MH Nguyen, YT Huang, CY Chen, IW Chang, CH Tseng, ...Gastroenterology 162 (4), 1160-1170. e1, 2022202
26
2022
Soluble intercellular adhesion molecule-1 is associated with hepatocellular carcinoma risk: multiplex analysis of serum markers
VL Chen, AK Le, O Podlaha, J Estevez, B Li, P Vutien, ET Chang, ...Scientific Reports 7 (1), 11169, 2017201
21
2017
Processed pseudogenes: the ‘fossilized footprints’ of past gene expression
O Podlaha, J ZhangTrends in Genetics 25 (10), 429-434, 090
20
2009
Accelerated Evolution and Loss of a Domain of the Sperm–Egg–Binding Protein SED1 in Ancestral Primates
O Podlaha, DM Webb, J ZhangMolecular biology and evolution 23 (10), 1828-1831, 2006200
16
2006
Pogostick: a new versatile piggyBac vector for inducible gene over-expression and down-regulation in emerging model systems
B Chen, S Hrycaj, JB Schinko, O Podlaha, EA Wimmer, A Popadić, ...PLoS One 6 (4), e18659, 2011201
16
2011
Large-scale viral genome analysis identifies novel clinical associations between hepatitis B virus and chronically infected patients
O Podlaha, E Gane, M Brunetto, S Fung, WL Chuang, CQ Pan, Z Jiang, ...Scientific Reports 9 (1), 10529, 2019201
14
2019
Genetic Basis of a Violation of Dollo’s Law: Re-Evolution of Rotating Sex Combs in Drosophila bipectinata
TD Seher, CS Ng, SA Signor, O Podlaha, O Barmina, A KoppGenetics 192 (4), 65-75, 2012201
14
2012
Whole-genome deep sequencing of hepatitis B virus in chronic hepatitis B patients reveals single nucleotide variants associated with baseline HBV DNA levels and HBeAg status
O Podlaha, P Revill, N Bhardwaj, L Zhuo, K Kitrinos, A Gaggar, Z Jiang, ...Journal of Hepatology 1 (66), S679, 2017201
4
2017