Author

Yang Zhang

University of Michigan - Cited by 50,108

Biography

Yang Zhang is worked in the Department of Health Statistics, the Fourth Military Medical University, Xian, China. He specializes in Health Statistics, medicine, biological science.
Title
Cited by
Year
Protein structure and sequence re-analysis of 2019-nCoV genome refutes snakes as its intermediate host or the unique similarity between its spike protein insertions and HIV-1
C Zhang, W Zheng, X Huang, EW Bell, X Zhou, Y ZhangJournal of proteome research 19, 1351-1360, 2020202
333
2020
Folding non-homologous proteins by coupling deep-learning contact maps with I-TASSER assembly simulations
W Zheng, C Zhang, Y Li, R Pearce, EW Bell, Y ZhangCell Reports Methods 1 (3), 100014, 2021202
233
2021
DeepMSA: constructing deep multiple sequence alignment to improve contact prediction and fold-recognition for distant-homology proteins
C Zhang, W Zheng, SM Mortuza, Y Li, Y ZhangBioinformatics 36 (7), 2105-2112, 2020202
131
2020
De novo design of protein peptides to block association of the SARS-CoV-2 spike protein with human ACE2
X Huang, R Pearce, Y ZhangAging 12 (12), 11263-11276, 2020106202
106
2020
Effects of SARS‐CoV‐2 mutations on protein structures and intraviral protein–protein interactions
S Wu, C Tian, P Liu, D Guo, W Zheng, X Huang, Y Zhang, L LiuJournal of medical virology 93 (4), 2132-2140, 2021202
94
2021
Deep learning techniques have significantly impacted protein structure prediction and protein design
R Pearce, Y ZhangCurrent Opinion in Structural Biology 68, 194-207, 2021202
81
2021
Deducing high-accuracy protein contact-maps from a triplet of coevolutionary matrices through deep residual convolutional networks.
Y Li, C Zhang, EW Bell, W Zheng, X Zhou, DJ Yu, Y ZhangPLoS Computational Biology 17 (3), e1008865, 2021202
70
2021
Toward the solution of the protein structure prediction problem
R Pearce, Y ZhangJournal of Biological Chemistry 297 (1), 100870, 2021202
66
2021
EvoEF2: accurate and fast energy function for computational protein design
X Huang, R Pearce,, Y ZhangBioinformatics 36 (4), 1135-1142, 2020202
66
2020
FASPR: an open-source tool for fast and accurate protein side-chain packing
X Huang, R Pearce, Y ZhangBioinformatics 36 (12), 3758–3765, 2020202
42
2020
Protein structure prediction using deep learning distance and hydrogen‐bonding restraints in CASP14
W Zheng, Y Li, C Zhang, X Zhou, R Pearce, EW Bell, X Huang, Y ZhangProteins: Structure, Function, and Bioinformatics 89 (12), 1734-1751, 2021202
41
2021
EDock: blind protein–ligand docking by replica-exchange monte carlo simulation
W Zhang, EW Bell, M Yin, Y ZhangJournal of Cheminformatics 12, 37, 2020202
40
2020
I-TASSER-MTD: a deep-learning-based platform for multi-domain protein structure and function prediction
X Zhou, W Zheng, Y Li, R Pearce, C Zhang, EW Bell, G Zhang, Y ZhangNature Protocols 17, 2326-2353, 2022202
39
2022
US-align: universal structure alignments of proteins, nucleic acids, and macromolecular complexes
C Zhang, M Shine, AM Pyle, Y ZhangNature Methods 19 (9), 1109-1115, 2022202
38
2022
FUpred: Detecting protein domains through deep-learning based contact map prediction
W Zheng, X Zhou, Q Wuyun, R Pearce, Y Li, Y ZhangBioinformatics 36, 3749–3757, 2020202
35
2020
Identifying the Zoonotic Origin of SARS-CoV-2 by Modeling the Binding Affinity between the Spike Receptor-Binding Domain and Host ACE2
X Huang, C Zhang, R Pearce, GS Omenn, Y ZhangJournal of Proteome Research 19, 4844-4856, 2020202
33
2020
SSIPe: accurately estimating protein–protein binding affinity change upon mutations using evolutionary profiles in combination with an optimized physical energy function
X Huang, W Zheng, R Pearce, Y ZhangBioinformatics 36 (8), 2429-2437, 2020202
33
2020
Improving fragment-based ab initio protein structure assembly using low-accuracy contact-map predictions
SM Mortuza, W Zheng, C Zhang, Y Li, R Pearce, Y ZhangNature Communications 12 (1), 5011, 2021202
32
2021
CGLFold: a contact-assisted de novo protein structure prediction using global exploration and loop perturbation sampling algorithm
J Liu, XG Zhou, Y Zhang, GJ ZhangBioinformatics 36 (8), 2443-2450, 2020202
26
2020
Progressive assembly of multi-domain protein structures from cryo-EM density maps
X Zhou, Y Li, C Zhang, W Zheng, G Zhang, Y ZhangNature Computational Science 2 (4), 265-275, 202
22
2022

Referred From: https://scholar.google.com/citations?user=MtBs-kMAAAAJ&hl=en

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Citations 50108
h-index 82
i10-index 214
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