Author

Raquel Tobes

Era7 Bioinformatics - Cited by 3,232 - Bioinformatics

Biography

Raquel Tobes is worked in research at the Hospital Virgen de las Nieves and at CSIC where she supervised several students. From 2004 she is Research Director of Era7 Bioinformatics where she also is a co-founder. Her main expertise is about Genomics, Next Generation Sequencing, Bioinformatics, Biological Databases, Bacterial Genomics and Metagenomics, Comparative genomics for bacterial pathogens, DNA repetitive sequences and Genomics Plasticity. In these fields she is mainly interested in the design and development of new algorithms, models, pipelines and visualizations to help in the interpretation of knowledge data related with sequences.
Title
Cited by
Year
Metagenomic analysis of milk of healthy and mastitis-suffering women
E Jiménez, J de Andrés, M Manrique, P Pareja-Tobes, R Tobes, ...Journal of Human Lactation 31 (3), 406-415, 2015201
241
2015
Bacterial repetitive extragenic palindromic sequences are DNA targets for Insertion Sequence elements
R Tobes, E ParejaBMC genomics 7, 1-12, 2006200
138
2006
Integrated metabolomics, transcriptomics and proteomics identifies metabolic pathways affected by anaplasma phagocytophilum infection in tick cells*[S]
M Villar, N Ayllón, P Alberdi, A Moreno, M Moreno, R Tobes, ...Molecular & Cellular Proteomics 14 (12), 3154-3172, 2015201
124
2015
Characterization of a Listeria monocytogenes Protein Interfering with Rab5a
C Alvarez‐Dominguez, F Madrazo‐Toca, L Fernandez‐Prieto, ...Traffic 9 (3), 325-337, 2008200
92
2008
Genomic analysis of the emergence and evolution of multidrug resistance during a Klebsiella pneumoniae outbreak including carbapenem and colistin resistance
E López-Camacho, R Gómez-Gil, R Tobes, M Manrique, M Lorenzo, ...Journal of Antimicrobial Chemotherapy 69 (3), 632-636, 2014201
80
2014
ExtraTrain: a database of Extragenic regions and Transcriptional information in prokaryotic organisms
E Pareja, P Pareja-Tobes, M Manrique, E Pareja-Tobes, J Bonal, R TobesBMC microbiology 6 (1), 1-10, 2006200
67
2006
Cutting edge: natural DNA repetitive extragenic sequences from gram-negative pathogens strongly stimulate TLR9
M Magnusson, R Tobes, J Sancho, E ParejaThe Journal of Immunology 179 (1), 31-35, 2007200
63
2007
BG7: a new approach for bacterial genome annotation designed for next generation sequencing data
P Pareja-Tobes, M Manrique, E Pareja-Tobes, E Pareja, R TobesPLoS One 7 (11), e49239, 2012201
59
2012
Emergence of NDM-producing Klebsiella pneumoniae and Escherichia coli in Spain: phylogeny, resistome, virulence and plasmids encoding blaNDM-like genes …
M Pérez-Vázquez, PJ Sola Campoy, A Ortega, V Bautista, S Monzón, ...Journal of Antimicrobial Chemotherapy 74 (12), 3489-3496, 2019201
54
2019
Normal mutation rate variants arise in a Mutator (Mut S) Escherichia coli population
MC Turrientes, F Baquero, BR Levin, JL Martínez, A Ripoll, ...PloS one 8 (9), e72963, 2013201
43
2013
A Systems Biology Approach to the Characterization of Stress Response in Dermacentor reticulatus Tick Unfed Larvae
M Villar, M Popara, N Ayllon, IG Fernandez de Mera, ...PLoS One 9 (2), e89564, 2014201
39
2014
The innate immunity role of cathepsin‐D is linked to Trp‐491 and Trp‐492 residues of listeriolysin O
E Carrasco‐Marín, F Madrazo‐Toca, JR De Los Toyos, E Cacho‐Alonso, ...Molecular microbiology 72 (3), 668-682, 2009200
35
2009
Bio4j: a high-performance cloud-enabled graph-based data platform
P Pareja-Tobes, R Tobes, M Manrique, E Pareja, E Pareja-TobesBioRxiv, 016758, 2015201
35
2015
Comparative Genomics of Field Isolates of Mycobacterium bovis and M. caprae Provides Evidence for Possible Correlates with Bacterial Viability and Virulence
J De la Fuente, I Diez-Delgado, M Contreras, J Vicente, A Cabezas-Cruz, ...PLOS Neglected Tropical Diseases 9 (11), e0004232, 2015201
28
2015
Identification and characterisation of T-cell epitopes for incorporation into dendritic cell-delivered Listeria vaccines
R Calderon-Gonzalez, R Tobes, E Pareja, E Frande-Cabanes, ...Journal of Immunological Methods 424, 111-119, 2015201
26
2015
In vivo attenuation and genetic evolution of a ST247-SCCmecI MRSA clone after 13 years of pathogenic bronchopulmonary colonization in a patient with cystic fibrosis …
E López-Collazo, T Jurado, J de Dios Caballero, M Pérez-Vázquez, ...Mucosal immunology 8 (2), 362-371, 2015201
23
2015
Pre-clinical development of Listeria-based nanovaccines as immunotherapies for solid tumours: insights from melanoma
H Terán-Navarro, R Calderon-Gonzalez, D Salcines-Cuevas, I García, ...Oncoimmunology 8 (2), e1541534, 2019201
21
2019
Bloody coli: a Gene Cocktail in Escherichia coli O104:H4
F Baquero, R TobesMBio 4 (1), 10.1128/mbio. 00066-13, 2013201
18
2013
Complete genome sequences of isolates of Enterococcus faecium sequence type 117, a globally disseminated multidrug-resistant clone
AP Tedim, VF Lanza, M Manrique, E Pareja, P Ruiz-Garbajosa, R Cantón, ...Genome announcements 5 (13), 10.1128/genomea. 01553-, 2017201
16
2017
Early OXA-48-Producing Enterobacterales Isolates Recovered in a Spanish Hospital Reveal a Complex Introduction Dominated by Sequence Type 11 (ST11) and …
D Gijón, AP Tedim, A Valverde, I Rodríguez, MI Morosini, TM Coque, ...MSphere 5 (2), e00080-20, 2020202
16
2020

Referred From: https://scholar.google.com/citations?hl=en&user=_y6oYGkAAAAJ

Cited by
Citations 3232
h-index 23
i10-index 34
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